BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018H11LP1|AL427403
(989 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig702 1892 0.0
>3x_Contig702
Length = 2831
Score = 1892 bits (953), Expect = 0.0
Identities = 969/973 (99%), Gaps = 2/973 (0%)
Strand = Plus / Minus
Query: 19 ggcgccagtsgctgctacttcaatcatcattgtcgttgatttactatcacataaacgcac 78
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2831 ggcgccagtcgctgctacttcaatcatcattgtcgttgatttactatcacataaacgcac 2772
Query: 79 acactttcctgattatgaccccattgtacaagtactataactacaatagaacatcaataa 138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2771 acactttcctgattatgaccccattgtacaagtactataactacaatagaacatcaataa 2712
Query: 139 tactgttacagtgttatctttatgccaaatcatttgaactgtaccatatggttatttttt 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2711 tactgttacagtgttatctttatgccaaatcatttgaactgtaccatatggttatttttt 2652
Query: 199 gtcataataatgtccctattcagtttattatagcaaagggacacgggctgctccttttgc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2651 gtcataataatgtccctattcagtttattatagcaaagggacacgggctgctccttttgc 2592
Query: 259 ataaacacttaaatgaaaagtgcgtactattacgttgttttgttatttacattttactgc 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2591 ataaacacttaaatgaaaagtgcgtactattacgttgttttgttatttacattttactgc 2532
Query: 319 tatatcaatgatggcattaattttcgctattcttacaatcatatacatatatacatgcat 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2531 tatatcaatgatggcattaattttcgctattcttacaatcatatacatatatacatgcat 2472
Query: 379 atattagatattacactattatcagttttcttctcataaacacatgtcatggccacgcat 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2471 atattagatattacactattatcagttttcttctcataaacacatgtcatggccacgcat 2412
Query: 439 tactatgattaggttatcctttaattaatattcaaactctattccgtaagactctctgtg 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2411 tactatgattaggttatcctttaattaatattcaaactctattccgtaagactctctgtg 2352
Query: 499 gtctttgctgaacttcattttctacgggattgtgctgtctgagttttcttagagatctac 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2351 gtctttgctgaacttcattttctacgggattgtgctgtctgagttttcttagagatctac 2292
Query: 559 tgaccctaggagtcgctatttcctctggaggcggtggcacttgatcatcatcttcatcat 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2291 tgaccctaggagtcgctatttcctctggaggcggtggcacttgatcatcatcttcatcat 2232
Query: 619 catctgaatactcctcagcttctgcatcatctagcgagaaaccttcatcttctaaaccgt 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2231 catctgaatactcctcagcttctgcatcatctagcgagaaaccttcatcttctaaaccgt 2172
Query: 679 ctgcctcttcaaactcttcctcaatttcttgctcatcgccatttatatcatcgtgcatac 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2171 ctgcctcttcaaactcttcctcaatttcttgctcatcgccatttatatcatcgtgcatac 2112
Query: 739 ctccgctgatcagtgttttggcatcagaagcatcgccagaaggtgtaccttcattgagag 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2111 ctccgctgatcagtgttttggcatcagaagcatcgccagaaggtgtaccttcattgagag 2052
Query: 799 ctggaatagt-cccccgagcttcgtattgagttgtttgaattcaggttttattttgcttg 857
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2051 ctggaatagtccccccgagcttcgtattgagttgtttgaattcaggttttattttgcttg 1992
Query: 858 ccttaatgattttttccttgatattgcttggaagtgtatatgctcgaactaaagatttat 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1991 ccttaatgattttttccttgatattgcttggaagtgtatatgctcgaactaaagatttat 1932
Query: 918 cagacaaggatacaggaatagtttgttgcttaatcttttccattgcagcttc-tycatcg 976
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 1931 cagacaaggatacaggaatagtttgttgcttaatcttttccattgcagcttcttccatcg 1872
Query: 977 ttcttggatccgc 989
|||||||||||||
Sbjct: 1871 ttcttggatccgc 1859
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8822
Number of Sequences: 1807
Number of extensions: 8822
Number of successful extensions: 203
Number of sequences better than 1.0e-20: 1
length of query: 989
length of database: 10,358,551
effective HSP length: 16
effective length of query: 973
effective length of database: 10,329,639
effective search space: 10050738747
effective search space used: 10050738747
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)